STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86087.1Putative ammonia monooxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (351 aa)    
Predicted Functional Partners:
CCH86084.1
Homologs of previously reported genes of unknown function.
       0.689
CCH86085.1
Homologs of previously reported genes of unknown function.
       0.689
CCH86086.1
Transcriptional regulator, ArsR family; Function of strongly homologous gene; regulator.
       0.689
CCH86088.1
Homologs of previously reported genes of unknown function.
       0.578
CCH89047.1
Homologs of previously reported genes of unknown function.
  
    0.479
CCH89046.1
Homologs of previously reported genes of unknown function.
 
    0.464
CCH89048.1
Homologs of previously reported genes of unknown function.
 
    0.430
cobO
Cob(I)yrinic acid a,c-diamide adenosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.421
chlD
Cobaltochelatase subunit; Function of strongly homologous gene; transporter.
       0.421
cbiQ
Cobalt ABC transporter, permease protein CbiQ; Function of strongly homologous gene; transporter.
 
     0.413
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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