STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86117.1Homologs of previously reported genes of unknown function. (237 aa)    
Predicted Functional Partners:
CCH85723.1
Transcriptional regulator, putative ATPase, winged helix family; Function of strongly homologous gene; regulator.
  
     0.668
bar
Barbiturase; Responsible for the hydrolysis of barbituric acid (2,4,6- trihydroxy-1,3-pyrimidine), an intermediate in the oxidative catabolism of pyrimidines. Catalyzes the hydrolytic opening of the pyrimidine ring of barbituric acid to yield ureidomalonic acid; Belongs to the cyclic amide hydrolase (CyAH) family.
  
     0.580
gnuT
Gluconate permease; Function of strongly homologous gene; transporter.
 
     0.537
hyuB
N-methylhydantoinase B/acetone carboxylase, alpha subunit; Function of strongly homologous gene; enzyme.
  
     0.523
CCH87584.1
Homologs of previously reported genes of unknown function.
  
     0.463
hyuA
N-methylhydantoinase A/acetone carboxylase, beta subunit; Function of strongly homologous gene; enzyme.
  
     0.454
sucD
Succinyl-CoA synthetase, alpha subunit; Function of strongly homologous gene; enzyme.
  
     0.438
CCH85640.1
Homologs of previously reported genes of unknown function.
  
     0.417
CCH87959.1
Prevent-host-death protein, Putative antitoxin of TAS system; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.408
CCH87235.1
Homologs of previously reported genes of unknown function.
  
     0.402
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.