STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86131.1Septum site determining protein; Function of strongly homologous gene; cell process. (359 aa)    
Predicted Functional Partners:
CCH86133.1
Putative Flp pilus assembly protein TadB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
     0.895
CCH86134.1
Type II secretion system F domain protein; Function of strongly homologous gene; cell process.
 
     0.862
CCH86132.1
Putative conjugal transfer protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process.
      0.839
CCH86130.1
Inhibition of morphological differentiation protein; Function of strongly homologous gene; cell process.
     
 0.774
MODMU_4496
Fragment of HNH endonuclease (part 1); Function of strongly homologous gene; enzyme.
  
    0.683
CCH87291.1
Homologs of previously reported genes of unknown function.
  
    0.659
CCH86259.1
Putative ParB domain protein nuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.634
parB
Chromosome-partitioning protein parB; Function of homologous gene experimentally demonstrated in an other organism; cell process; Belongs to the ParB family.
  
 
 0.634
CCH86371.1
Flp pilus assembly protein CpaB, SAF domain; Function of strongly homologous gene; cell process.
 
   
 0.630
CCH86135.1
Homologs of previously reported genes of unknown function.
       0.606
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.