STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86171.1Protein of unknown function; No homology to any previously reported sequences. (261 aa)    
Predicted Functional Partners:
CCH86170.1
Homologs of previously reported genes of unknown function.
       0.794
CCH85859.1
Putative Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; receptor.
    
  0.609
CCH86306.1
Diguanylate kinase; Function of strongly homologous gene; enzyme.
    
  0.609
CCH86925.1
PAS domain S-box/diguanylate cyclase (GGDEF) (modular protein); Function of strongly homologous gene; enzyme.
    
  0.609
CCH87562.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); Function of strongly homologous gene; receptor.
    
  0.609
CCH90356.1
Diguanylate cyclase/phosphodiesterase (modular protein).
    
  0.609
CCH86169.1
Diguanylate cyclase (GGDEF); Function of strongly homologous gene; enzyme.
    
  0.599
CCH86172.1
Exported protein of unknown function; No homology to any previously reported sequences.
       0.565
CCH86986.1
Homologs of previously reported genes of unknown function.
   
 
 0.477
metK
Methionine adenosyltransferase 1 (AdoMet synthetase); Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
     
 0.468
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.