STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86208.1Homologs of previously reported genes of unknown function. (194 aa)    
Predicted Functional Partners:
CCH89772.1
Homologs of previously reported genes of unknown function.
  
 
   0.877
qcrA
Menaquinol-cytochrome c reductase iron-sulfur subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.805
ctaF
Cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
 
   0.798
qcrB
Menaquinol-cytochrome c reductase cytochrome b subunit; Function of strongly homologous gene; enzyme.
   
 
 0.761
ctaC
Cytochrome c oxidase subunit 2; Function of strongly homologous gene; enzyme.
  
   0.755
CCH86997.1
Homologs of previously reported genes of unknown function.
  
 
   0.746
ctaE
Cytochrome c oxidase subunit 3; Function of strongly homologous gene; enzyme.
  
   0.730
CCH90524.1
Homologs of previously reported genes of unknown function.
  
     0.719
CCH90037.1
Homologs of previously reported genes of unknown function.
  
     0.716
CCH89344.1
Homologs of previously reported genes of unknown function.
  
     0.711
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.