STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH86222.1Homologs of previously reported genes of unknown function. (268 aa)    
Predicted Functional Partners:
CCH86221.1
Putative Oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.773
CCH90814.1
Putative 5,10-methylenetetrahydromethanopterin reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.742
CCH90084.1
F420-dependent oxidoreductase; Function of strongly homologous gene; enzyme.
 
   
 0.727
cofD
LPPG:FO 2-phospho-L-lactate transferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.698
CCH90308.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.657
CCH89079.1
Homologs of previously reported genes of unknown function.
  
     0.544
CCH86223.1
Homologs of previously reported genes of unknown function.
       0.540
CCH86807.1
Homologs of previously reported genes of unknown function.
  
   
 0.524
CCH86785.1
Pyridoxamine 5'-phosphate oxidase-related FMN-binding; Function of strongly homologous gene; enzyme.
  
     0.481
CCH87556.1
NADPH-dependent FMN reductase; Function of strongly homologous gene; enzyme.
 
 0.467
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.