STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86232.1Putative HAD hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (273 aa)    
Predicted Functional Partners:
pgsA
Phosphatidylglycerophosphate synthase; Function of strongly homologous gene; enzyme.
 
    0.738
CCH89894.1
Homologs of previously reported genes of unknown function.
 
    0.733
CCH86537.1
Protein of unknown function; No homology to any previously reported sequences.
 
 
 
 0.706
CCH87712.1
HNH endonuclease (fragment); Function of strongly homologous gene; enzyme.
  
     0.703
CCH89013.1
Homologs of previously reported genes of unknown function.
  
     0.623
CCH86878.1
Bacteriophytochrome heme oxygenase; Function of strongly homologous gene; carrier.
  
     0.602
CCH88948.1
Putative metalloprotease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.567
thrC
L-threonine synthase; Function of strongly homologous gene; enzyme.
  
  
 0.558
CCH85899.1
Putative polysaccharide pyruvyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.555
CCH90352.1
HNH endonuclease; Function of strongly homologous gene; enzyme.
  
     0.554
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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