Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCH86245.1Phage integrase; Function of strongly homologous gene; enzyme; Belongs to the 'phage' integrase family. (372 aa)    
Predicted Functional Partners:
CCH90066.1
Predicted amidophosphoribosyltransferase; Function of strongly homologous gene; carrier.
   
    0.485
trwC
Conjugative relaxase TrwC; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.470
korA
2-oxoacid:ferredoxin oxidoreductase, alpha subunit; Function of strongly homologous gene; enzyme.
    
  0.454
CCH85999.1
Prephenate dehydrogenase; Function of strongly homologous gene; enzyme.
  
    0.429
CCH90572.1
Phage integrase; Function of strongly homologous gene; enzyme; Belongs to the 'phage' integrase family.
 
 
 
0.427
CCH87109.1
Integrase, Lambda phage type; Function of strongly homologous gene; enzyme; Belongs to the 'phage' integrase family.
 
 
 
0.425
CCH85795.1
Prophage phiRv2 integrase; Function of strongly homologous gene; enzyme; Belongs to the 'phage' integrase family.
 
 
 
0.415
whiA
Sporulation transcription regulator whiA; Involved in cell division and chromosome segregation.
   
    0.411
CCH89974.1
Protein of unknown function; No homology to any previously reported sequences; Belongs to the SOS response-associated peptidase family.
   
    0.411
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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