STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH86260.1Homologs of previously reported genes of unknown function. (367 aa)    
Predicted Functional Partners:
CCH86259.1
Putative ParB domain protein nuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.755
CCH88524.1
Putative conjugative transfer gene complex protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
    0.733
CCH89129.1
Type IV secretory pathway VirD4-like; Function of strongly homologous gene; cell process.
 
    0.727
CCH87133.1
Homologs of previously reported genes of unknown function.
 
    0.719
CCH89134.1
Homologs of previously reported genes of unknown function.
 
   
 0.700
CCH87131.1
Homologs of previously reported genes of unknown function.
 
   
 0.698
CCH88529.1
Homologs of previously reported genes of unknown function.
 
   
 0.698
CCH89135.1
Homologs of previously reported genes of unknown function.
 
     0.602
CCH87130.1
Homologs of previously reported genes of unknown function.
 
     0.574
CCH88530.1
Homologs of previously reported genes of unknown function.
 
     0.573
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.