STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86268.1Homologs of previously reported genes of unknown function. (395 aa)    
Predicted Functional Partners:
CCH86937.1
ABC transporter, ATP-binding protein; Function of strongly homologous gene; transporter.
 
 0.948
CCH86938.1
ABC transporter, permease protein; Function of strongly homologous gene; transporter.
 
 0.934
CCH86244.1
ABC-type proline/glycine betaine transport permease; Function of strongly homologous gene; transporter.
 
 0.931
CCH86270.1
Putative NDP-sugar epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.796
CCH89559.1
ABC transporter (ATP binding protein)(tauB-like); Function of strongly homologous gene; transporter.
  
 0.792
CCH86933.1
FAD/FMN-dependent dehydrogenase; Function of strongly homologous gene; enzyme.
 
     0.773
CCH86943.1
Putative FAD/FMN-containing dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.771
codA
Cytosine deaminase; Function of strongly homologous gene; enzyme.
 
     0.766
fdhA2
Formate dehydrogenase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.758
CCH86269.1
Putative Mandelate racemase/muconate lactonizing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
     0.757
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.