STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86287.1Major facilitator superfamily MFS_1; Function of strongly homologous gene; transporter. (484 aa)    
Predicted Functional Partners:
CCH86286.1
Homologs of previously reported genes of unknown function.
       0.693
CCH86288.1
Homologs of previously reported genes of unknown function.
       0.648
CCH85836.1
Homologs of previously reported genes of unknown function.
  
     0.593
glnD
[Protein-PII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.
  
     0.585
CCH90949.1
Homologs of previously reported genes of unknown function.
  
     0.549
CCH88778.1
Bacterial lipid A biosynthesis acyltransferase; Function of strongly homologous gene; enzyme.
  
   
 0.518
CCH86289.1
GCN5-related N-acetyltransferase; Function of strongly homologous gene; enzyme.
       0.517
CCH90864.1
Fatty acid desaturase; Function of strongly homologous gene; enzyme.
  
     0.508
CCH90941.1
Transcriptional regulator, PadR family; Function of strongly homologous gene; regulator.
  
     0.496
CCH86445.1
Homologs of previously reported genes of unknown function.
  
     0.495
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.