STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86309.1Homologs of previously reported genes of unknown function. (188 aa)    
Predicted Functional Partners:
CCH86310.1
Homologs of previously reported genes of unknown function.
      0.892
CCH86576.1
Homologs of previously reported genes of unknown function.
  
     0.739
CCH89636.1
Conserved protein of unknown function (putative Restriction endonuclease domain); Homologs of previously reported genes of unknown function.
  
     0.716
CCH88758.1
Homologs of previously reported genes of unknown function.
  
     0.704
CCH86715.1
Homologs of previously reported genes of unknown function.
  
     0.690
CCH90204.1
Homologs of previously reported genes of unknown function.
  
     0.615
CCH88831.1
Putative HNH endonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.584
CCH86308.1
NAD/FAD-dependent oxidoreductase; Function of strongly homologous gene; enzyme.
       0.541
CCH86311.1
tRNA/rRNA methyltransferase; Function of strongly homologous gene; enzyme.
       0.510
CCH90685.1
Putative HNH endonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.498
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.