STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86314.1ABC transporter; Function of strongly homologous gene; transporter. (597 aa)    
Predicted Functional Partners:
CCH87419.1
Transporter subunit: ATP-binding component of ABC superfamily transporter; Function of strongly homologous gene; transporter.
 
    
0.901
CCH86313.1
ABC-type transport system, ATPase; Function of strongly homologous gene; enzyme.
 
    
0.822
cbiO
Membrane associated cobalt transport protein CbiO, ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
     
0.734
pstB
High-affinity phosphate transport protein (ABC superfamily, atp_bind); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.586
CCH86315.1
Homologs of previously reported genes of unknown function.
       0.584
dnaK
Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70); Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.540
CCH86312.1
Homologs of previously reported genes of unknown function.
 
     0.513
CCH88905.1
ABC transporter; Function of strongly homologous gene; transporter.
  
  0.503
CCH85773.1
Homologs of previously reported genes of unknown function.
  
     0.434
dnaJ-2
Chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several [...]
  
 
 
 0.432
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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