STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH86321.1Glycosyl transferase; Function of strongly homologous gene; enzyme. (402 aa)    
Predicted Functional Partners:
CCH86320.1
Putative deacetylase, LmbE family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
  0.952
CCH86323.1
Homologs of previously reported genes of unknown function.
 
     0.945
CCH86322.1
Homologs of previously reported genes of unknown function.
 
     0.936
CCH86324.1
Oxidoreductase; Function of strongly homologous gene; enzyme.
 
    0.932
CCH86327.1
Inositol-3-phosphate synthase; Function of strongly homologous gene; enzyme.
 
   
 0.906
exoB
UDP-glucose 4-epimerase; Function of strongly homologous gene; enzyme.
 
  
 0.850
CCH86325.1
Methyltransferase type 11.
     
 0.774
CCH86326.1
Homologs of previously reported genes of unknown function.
       0.773
CCH87769.1
Homologs of previously reported genes of unknown function.
  
     0.726
CCH86632.1
Homologs of previously reported genes of unknown function.
  
     0.554
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.