STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86353.1Aldose 1-epimerase; Function of strongly homologous gene; enzyme. (298 aa)    
Predicted Functional Partners:
galK
Galactokinase; Function of strongly homologous gene; enzyme; Belongs to the GHMP kinase family.
  
 0.951
galK-2
Galactokinase; Function of strongly homologous gene; enzyme; Belongs to the GHMP kinase family. GalK subfamily.
  
 0.951
CCH87627.1
Glycoside hydrolase; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.909
CCH88400.1
Glycoside hydrolase family 2 sugar binding; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.909
glcK
Glucokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.906
ppgK
Polyphosphate glucokinase; Function of strongly homologous gene; enzyme.
    
 0.906
CCH86356.1
ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter.
       0.779
CCH86354.1
Sugar uptake ABC transporter permease; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.778
CCH86355.1
Ribose transport system permease protein rbsC; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.778
CCH86357.1
Sugar uptake ABC transporter solute-binding protein; Function of strongly homologous gene; transporter.
       0.564
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.