Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH86353.1Aldose 1-epimerase; Function of strongly homologous gene; enzyme. (298 aa)    
Predicted Functional Partners:
CCH86356.1
ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter.
       0.778
CCH86354.1
Sugar uptake ABC transporter permease; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.777
CCH86355.1
Ribose transport system permease protein rbsC; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.777
galK
Galactokinase; Function of strongly homologous gene; enzyme; Belongs to the GHMP kinase family.
  
 0.712
galK-2
Galactokinase; Function of strongly homologous gene; enzyme; Belongs to the GHMP kinase family. GalK subfamily.
  
 0.712
CCH86357.1
Sugar uptake ABC transporter solute-binding protein; Function of strongly homologous gene; transporter.
     
 0.581
galT
Galactose-1-phosphate uridylyltransferase; Function of strongly homologous gene; enzyme.
  
 0.580
CCH86352.1
Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.556
pheT
Phenylalanyl-tRNA synthetase beta chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.522
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
 
 0.520
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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