STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobB-2Sir2-family regulator protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. (281 aa)    
Predicted Functional Partners:
CCH86363.1
Homologs of previously reported genes of unknown function.
     
 0.787
CCH89774.1
Cell envelope-related function transcriptional attenuator common domain; Function of strongly homologous gene; regulator.
   
    0.771
CCH86023.1
Transcriptional regulator, HxlR family; Function of strongly homologous gene; regulator.
  
    0.738
CCH86364.1
Homologs of previously reported genes of unknown function.
       0.729
CCH90635.1
MarR family transcriptional regulator.
   
    0.672
CCH86361.1
Homologs of previously reported genes of unknown function.
       0.596
CCH90040.1
Transcriptional regulator, LysR family; Function of strongly homologous gene; regulator; Belongs to the LysR transcriptional regulatory family.
   
    0.594
CCH90898.1
Conserved protein of unknown function, putative Ca2+-binding domain; Homologs of previously reported genes of unknown function.
   
    0.589
CCH88048.1
Transcriptional regulator, AsnC family; Function of strongly homologous gene; regulator.
  
    0.580
sufR
Iron-sulfur cluster transcriptional regulator; Function of strongly homologous gene; factor.
   
    0.578
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.