Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH86371.1Flp pilus assembly protein CpaB, SAF domain; Function of strongly homologous gene; cell process. (206 aa)    
Predicted Functional Partners:
CCH86134.1
Type II secretion system F domain protein; Function of strongly homologous gene; cell process.
 
 
 0.782
CCH86133.1
Putative Flp pilus assembly protein TadB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
 
 0.757
mscL
Fragment of conserved protein of unknown function (part 2); Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
       0.741
CCH86775.1
Flp pilus assembly protein TadC; Function of homologous gene experimentally demonstrated in an other organism; cell process.
 
 
 0.739
flpE
Pilus assembly protein ATPase; Function of strongly homologous gene; cell process.
  
 
 0.724
CCH87116.1
Homologs of previously reported genes of unknown function.
  
 
 0.724
CCH90055.1
ATPase involved in chromosome partitioning; Function of strongly homologous gene; enzyme.
  
 
 0.724
CCH86782.1
Flp/Fap pilin component; Function of strongly homologous gene; structure.
  
  
 0.676
CCH86784.1
Flp/Fap pilin component; Function of strongly homologous gene; structure.
  
  
 0.676
CCH86131.1
Septum site determining protein; Function of strongly homologous gene; cell process.
 
   
 0.624
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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