STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86371.1Flp pilus assembly protein CpaB, SAF domain; Function of strongly homologous gene; cell process. (206 aa)    
Predicted Functional Partners:
mscL
Fragment of conserved protein of unknown function (part 2); Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
       0.734
CCH86133.1
Putative Flp pilus assembly protein TadB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
  
 0.720
CCH86134.1
Type II secretion system F domain protein; Function of strongly homologous gene; cell process.
 
  
 0.720
CCH86775.1
Flp pilus assembly protein TadC; Function of homologous gene experimentally demonstrated in an other organism; cell process.
 
  
 0.664
CCH86131.1
Septum site determining protein; Function of strongly homologous gene; cell process.
 
   
 0.630
CCH86782.1
Flp/Fap pilin component; Function of strongly homologous gene; structure.
  
  
 0.608
CCH86784.1
Flp/Fap pilin component; Function of strongly homologous gene; structure.
  
  
 0.608
flpE
Pilus assembly protein ATPase; Function of strongly homologous gene; cell process.
  
  
 0.600
CCH87116.1
Homologs of previously reported genes of unknown function.
  
  
 0.600
CCH90055.1
ATPase involved in chromosome partitioning; Function of strongly homologous gene; enzyme.
  
  
 0.600
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.