STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86374.1Glyoxalase/bleomycin resistance protein/dioxygenase; Function of strongly homologous gene; enzyme. (139 aa)    
Predicted Functional Partners:
CCH86375.1
Transcriptional regulator, AraC family; Function of strongly homologous gene; regulator.
 
    0.958
uvrA
Excision nuclease ABC subunit; Function of strongly homologous gene; enzyme.
     0.864
CCH86740.1
Transcriptional regulator RamA, AraC family; Function of strongly homologous gene; regulator.
 
    0.805
CCH90843.1
Putative Glyoxalase protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
  0.699
CCH86438.1
L-threonine ammonia-lyase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
  0.639
CCH86373.1
Transcriptional regulator, FmdB family; Function of strongly homologous gene; regulator.
       0.465
CCH86254.1
Putative Rhodanese-related sulfurtransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
  0.444
CCH86367.1
Glyoxalase/bleomycin resistance protein/dioxygenase; Function of strongly homologous gene; enzyme.
 
 
  0.433
pheB
Metapyrocatechase; Function of strongly homologous gene; enzyme.
    
  0.431
CCH89371.1
Transcriptional regulator, winged helix family; Function of strongly homologous gene; regulator.
  
    0.402
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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