STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86379.1Homologs of previously reported genes of unknown function. (194 aa)    
Predicted Functional Partners:
CCH89442.1
Homologs of previously reported genes of unknown function.
  
     0.628
CCH89148.1
Homologs of previously reported genes of unknown function.
  
     0.604
CCH90713.1
Homologs of previously reported genes of unknown function.
  
     0.600
CCH85684.1
Homologs of previously reported genes of unknown function.
  
     0.595
CCH86620.1
Homologs of previously reported genes of unknown function.
 
     0.561
CCH89732.1
Anti-sigma factor; Function of strongly homologous gene; factor.
  
     0.529
accD-2
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Function of strongly homologous gene; enzyme.
       0.495
CCH86381.1
Formyl-CoA transferase; Function of strongly homologous gene; enzyme; Belongs to the CoA-transferase III family.
       0.495
CCH86802.1
Homologs of previously reported genes of unknown function.
  
     0.462
CCH86800.1
Homologs of previously reported genes of unknown function.
  
     0.444
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.