STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtaBUTP--glucose-1-phosphate uridylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (314 aa)    
Predicted Functional Partners:
galE-2
UDP-glucose 4-epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.968
otsA
Trehalose-phosphate synthase; Function of strongly homologous gene; enzyme.
    
 0.968
exoB
UDP-glucose 4-epimerase; Function of strongly homologous gene; enzyme.
  
 0.964
rkpK
UDP-glucose 6-dehydrogenase; Function of strongly homologous gene; enzyme.
 
 0.963
rkpK-2
UDP-glucose 6-dehydrogenase; Function of strongly homologous gene; enzyme.
 
 0.963
pgm
Phosphomannomutase/phosphoglucomutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.941
glgP
Glycogen phosphorylase; Function of strongly homologous gene; enzyme.
     
 0.939
glgC
Glucose-1-phosphate adenylyltransferase; Function of strongly homologous gene; enzyme; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
     
 0.936
glgC-2
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
     
 0.936
glgC-3
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
     
 0.936
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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