STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pmtProtein O-mannosyl transferase; Function of strongly homologous gene; enzyme. (507 aa)    
Predicted Functional Partners:
rsmI
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.681
CCH85478.1
Homologs of previously reported genes of unknown function.
  
     0.659
CCH90367.1
ResB protein required for cytochrome c biosynthesis; Function of strongly homologous gene; cell process.
  
     0.654
CCH87401.1
Homologs of previously reported genes of unknown function.
  
     0.642
CCH87277.1
Homologs of previously reported genes of unknown function.
  
     0.632
CCH90067.1
Lipoprotein LpqB, beta-propeller domain-like protein; Function of strongly homologous gene; cell process.
  
     0.631
CCH89341.1
Homologs of previously reported genes of unknown function.
  
     0.627
CCH86048.1
Metallophosphoesterase; Function of strongly homologous gene; enzyme.
  
     0.621
CCH87179.1
DNA polymerase III, delta subunit; Function of strongly homologous gene; enzyme.
  
     0.610
CCH87087.1
Putative cytochrome c biogenesis membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
     0.606
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.