STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86410.1Phosphatidylglycerophosphate synthase; Function of strongly homologous gene; enzyme; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (256 aa)    
Predicted Functional Partners:
CCH86409.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
 
     0.946
CCH86412.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
 
     0.940
CCH86415.1
Conserved secreted protein of unknown function, putative PKD domains; Homologs of previously reported genes of unknown function.
 
    0.865
tagD
Glycerol-3-phosphate cytidyltransferase; Function of strongly homologous gene; enzyme.
 
  
 0.851
CCH85541.1
Competence/damage-inducible CinA-like protein; Function of strongly homologous gene; cell process; Belongs to the CinA family.
  
  
 0.805
CCH86411.1
Homologs of previously reported genes of unknown function.
       0.785
CCH86413.1
Polysaccharide deacetylase; Function of strongly homologous gene; enzyme.
       0.777
CCH86408.1
Protein of unknown function; No homology to any previously reported sequences.
       0.572
CCH86414.1
Homologs of previously reported genes of unknown function.
       0.548
CCH85903.1
Exopolysaccharide xanthan biosynthesis glycosyltransferase; Function of strongly homologous gene; enzyme.
 
     0.541
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.