STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86415.1Conserved secreted protein of unknown function, putative PKD domains; Homologs of previously reported genes of unknown function. (1505 aa)    
Predicted Functional Partners:
CCH86410.1
Phosphatidylglycerophosphate synthase; Function of strongly homologous gene; enzyme; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
    0.865
CCH86409.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
 
     0.858
tagD
Glycerol-3-phosphate cytidyltransferase; Function of strongly homologous gene; enzyme.
 
     0.831
CCH86412.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
 
     0.820
CCH85903.1
Exopolysaccharide xanthan biosynthesis glycosyltransferase; Function of strongly homologous gene; enzyme.
  
     0.619
CCH86414.1
Homologs of previously reported genes of unknown function.
       0.565
CCH86417.1
Homologs of previously reported genes of unknown function.
       0.555
CCH86416.1
Homologs of previously reported genes of unknown function.
       0.544
CCH86411.1
Homologs of previously reported genes of unknown function.
       0.521
CCH86541.1
Glycoside hydrolase family 16; Function of strongly homologous gene; enzyme.
 
   
 0.489
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.