STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86416.1Homologs of previously reported genes of unknown function. (419 aa)    
Predicted Functional Partners:
CCH86417.1
Homologs of previously reported genes of unknown function.
       0.773
wcaJ-2
Undecaprenyl-phosphate galactose phosphotransferase; Function of strongly homologous gene; enzyme.
  
 
 0.695
CCH85911.1
Homologs of previously reported genes of unknown function.
  
  
 0.576
CCH86415.1
Conserved secreted protein of unknown function, putative PKD domains; Homologs of previously reported genes of unknown function.
       0.539
CCH85940.1
Glycosyl transferase family 8; Function of strongly homologous gene; enzyme.
  
 
 0.506
CCH85980.1
Putative D,D-heptose 1,7-bisphosphate phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.470
manC
Mannose-1-phosphate guanylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.445
CCH86409.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
  
 
 0.430
CCH86412.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
  
 
 0.430
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.