STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86433.1Lysophospholipase L1-like esterase; Function of strongly homologous gene; enzyme. (339 aa)    
Predicted Functional Partners:
CCH86434.1
Homologs of previously reported genes of unknown function.
       0.550
fadA-2
3-ketoacyl-CoA thiolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.538
CCH90398.1
Homologs of previously reported genes of unknown function.
  
     0.538
ssb-2
Single-stranded DNA-binding protein ssb; Function of strongly homologous gene; cell process.
  
     0.506
CCH90047.1
Homologs of previously reported genes of unknown function.
  
     0.484
cofC
2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
  
     0.473
CCH86052.1
Arsenite-transporting ATPase; Function of strongly homologous gene; enzyme.
  
     0.468
CCH90251.1
Predicted hydrolase or acyltransferase of alpha/beta superfamily (chlorine peroxidase); Function of strongly homologous gene; enzyme.
  
    0.457
CCH89691.1
Homologs of previously reported genes of unknown function.
  
     0.426
CCH88598.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
  
     0.410
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.