STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86437.1Mg-chelatase; Function of strongly homologous gene; enzyme. (491 aa)    
Predicted Functional Partners:
CCH86436.1
Putative magnesium-chelatase subunit chlD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    0.988
chlD
Cobaltochelatase subunit; Function of strongly homologous gene; transporter.
  
 0.957
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
 
 0.925
hemY
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
   
 
 0.915
CCH88993.1
Conserved membrane protein of unknown function: putativeVon Willebrand factor type A domain (vwa); Homologs of previously reported genes of unknown function.
 
 
 0.651
CCH85988.1
Homologs of previously reported genes of unknown function.
 
 
 0.637
CCH90762.1
Putative von Willebrand factor type A, containing CoxE-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
 
 0.591
CCH90785.1
Putative von Willebrand factor type A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
 
 0.591
CCH86435.1
GCN5-related N-acetyltransferase (fragment); Function of strongly homologous gene; enzyme.
     
 0.587
CCH86438.1
L-threonine ammonia-lyase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.555
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.