STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86457.1ABC-2 type transporter; Function of strongly homologous gene; transporter. (268 aa)    
Predicted Functional Partners:
CCH86456.1
ABC-type transport system, ATP-binding protein; Function of strongly homologous gene; enzyme.
 
    0.958
CCH86455.1
Transcriptional regulator, PadR family; Function of strongly homologous gene; regulator.
 
     0.818
drrA
Daunorubicin resistance ATP-binding protein drrA; Function of strongly homologous gene; transporter.
 
    0.815
CCH90775.1
Putative daunorubicin resistance ATP-binding protein drrA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
    0.813
CCH89369.1
Antibiotic resistance ATP-binding protein; Function of strongly homologous gene; transporter.
 
    0.812
CCH86439.1
Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
    0.809
CCH90189.1
ABC-type multidrug transport system, ATPase component; Function of strongly homologous gene; enzyme.
 
    0.723
CCH86520.1
ABC transporter, ATPase; Function of strongly homologous gene; enzyme.
 
    0.715
CCH88970.1
ABC-type multidrug transport system, ATPase component (fragment); Function of strongly homologous gene; transporter.
 
    0.548
CCH86440.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; Function of strongly homologous gene; transporter.
  
  
 
0.537
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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