Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fliLFlagellar basal body-associated protein; Function of strongly homologous gene; structure. (157 aa)    
Predicted Functional Partners:
fliO
Flagellar protein flio; Function of strongly homologous gene; structure.
  
 
 0.977
fliM
Flagellar motor switch protein; Function of strongly homologous gene; structure.
  
 
 0.976
motA
Flagellar motor protein A; Function of strongly homologous gene; structure.
  
  
 0.976
fliQ
Flagellar biosynthetic protein fliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
  
  
 0.973
fliP
Flagellar transport protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.973
fliN
Flagellar motor switch/type III secretory pathway protein; Function of strongly homologous gene; structure.
  
  
 0.973
flgE
Flagellar hook protein flgE; Function of strongly homologous gene; structure.
  
  
 0.970
flgD
Flagellar hook capping protein; Function of strongly homologous gene; structure.
  
  
 0.962
fliG
Flagellar motor switch protein fliG; Function of strongly homologous gene; structure.
  
  
 0.961
CCH86477.1
Flagellar hook-length control protein; Function of strongly homologous gene; cell process.
  
  
 0.960
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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