STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH86478.1Lytic murein transglycosylase; Function of strongly homologous gene; enzyme. (314 aa)    
Predicted Functional Partners:
amiC
N-acetylmuramoyl-L-alanine amidase; Function of strongly homologous gene; enzyme.
  
 
 0.942
fliH
Flagellar biosynthesis/type III secretory pathway protein; Function of strongly homologous gene; structure.
 
  
 0.941
CCH86477.1
Flagellar hook-length control protein; Function of strongly homologous gene; cell process.
 
    0.904
flgD
Flagellar hook capping protein; Function of strongly homologous gene; structure.
 
    0.902
motB
Flagellar motor protein B; Function of strongly homologous gene; structure.
 
  
 0.885
fliI
Flagellum-specific ATP synthase; Function of strongly homologous gene; enzyme.
  
  
 0.883
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.881
fliG
Flagellar motor switch protein fliG; Function of strongly homologous gene; structure.
  
    0.860
fliE
Flagellar hook-basal body complex protein fliE; Function of strongly homologous gene; structure.
 
  
 0.855
fliJ
Flagellar export protein FliJ; Function of strongly homologous gene; structure.
  
    0.816
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.