Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| csrA | figL | MODMU_1045 | MODMU_1044 | Carbon storage regulator homolog; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | Flagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.915 |
| csrA | flgB | MODMU_1045 | MODMU_1036 | Carbon storage regulator homolog; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.759 |
| csrA | flgC | MODMU_1045 | MODMU_1035 | Carbon storage regulator homolog; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | Flagellar basal body rod protein; Function of strongly homologous gene; structure; Belongs to the flagella basal body rod proteins family. | 0.790 |
| csrA | flgK | MODMU_1045 | MODMU_1043 | Carbon storage regulator homolog; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | Flagellar hook-associated protein FlgK; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the flagella basal body rod proteins family. | 0.912 |
| csrA | fliC | MODMU_1045 | MODMU_1040 | Carbon storage regulator homolog; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | A-type flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.821 |
| csrA | fliD | MODMU_1045 | MODMU_1039 | Carbon storage regulator homolog; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | Flagellar hook-associated 2 protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.756 |
| csrA | fliF | MODMU_1045 | MODMU_1033 | Carbon storage regulator homolog; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | Flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.767 |
| csrA | fliM | MODMU_1045 | MODMU_1020 | Carbon storage regulator homolog; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | Flagellar motor switch protein; Function of strongly homologous gene; structure. | 0.820 |
| csrA | fliS | MODMU_1045 | MODMU_1038 | Carbon storage regulator homolog; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | Flagellar protein FliS; Function of strongly homologous gene; structure. | 0.822 |
| csrA | motA | MODMU_1045 | MODMU_1023 | Carbon storage regulator homolog; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | Flagellar motor protein A; Function of strongly homologous gene; structure. | 0.739 |
| figL | csrA | MODMU_1044 | MODMU_1045 | Flagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Carbon storage regulator homolog; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.915 |
| figL | flgB | MODMU_1044 | MODMU_1036 | Flagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.970 |
| figL | flgC | MODMU_1044 | MODMU_1035 | Flagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar basal body rod protein; Function of strongly homologous gene; structure; Belongs to the flagella basal body rod proteins family. | 0.965 |
| figL | flgK | MODMU_1044 | MODMU_1043 | Flagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar hook-associated protein FlgK; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the flagella basal body rod proteins family. | 0.992 |
| figL | fliC | MODMU_1044 | MODMU_1040 | Flagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | A-type flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.860 |
| figL | fliD | MODMU_1044 | MODMU_1039 | Flagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar hook-associated 2 protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.975 |
| figL | fliF | MODMU_1044 | MODMU_1033 | Flagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.940 |
| figL | fliM | MODMU_1044 | MODMU_1020 | Flagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar motor switch protein; Function of strongly homologous gene; structure. | 0.964 |
| figL | fliS | MODMU_1044 | MODMU_1038 | Flagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar protein FliS; Function of strongly homologous gene; structure. | 0.994 |
| figL | motA | MODMU_1044 | MODMU_1023 | Flagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar motor protein A; Function of strongly homologous gene; structure. | 0.941 |
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