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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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gene co-occurrence
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[Homology]
Score
CCH86510.1Serine-type D-Ala-D-Ala carboxypeptidase; Function of strongly homologous gene; enzyme. (255 aa)    
Predicted Functional Partners:
dacD
Protein of unknown function; Gene remnant; Belongs to the peptidase S11 family.
     
 0.775
dacB
D-alanyl-D-alanine carboxypeptidase, serine-type (modular protein); Function of strongly homologous gene; enzyme.
     
 0.761
pbpA
Peptidoglycan glycosyltransferase, penicillin-binding protein A; Function of strongly homologous gene; enzyme.
     
 0.752
ftsI
Cell division protein FtsI/penicillin-binding protein 2; Function of strongly homologous gene; enzyme.
     
 0.752
xseB
Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
       0.682
xseA
Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.682
CCH88133.1
Penicillin-binding protein transpeptidase.
     
 0.668
amiC
N-acetylmuramoyl-L-alanine amidase; Function of strongly homologous gene; enzyme.
    
 0.605
CCH86511.1
Protein of unknown function; No homology to any previously reported sequences.
       0.453
ponA
Membrane carboxypeptidase (Penicillin-binding protein); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.428
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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