STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
liaRTwo component transcriptional regulator liaR; Function of strongly homologous gene; regulator. (211 aa)    
Predicted Functional Partners:
liaS
Two component signal transduction histidine kinase involved in sensing cell wall stress response; Function of strongly homologous gene; enzyme.
 
 0.960
CCH87971.1
Two component integral membrane sensor signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
 
 0.814
CCH88277.1
Two component signal transduction histidine kinase; Function of strongly homologous gene; regulator.
 
 
 0.807
CCH89620.1
Two component integral membrane sensor signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
 
 0.804
CCH86521.1
ABC-2 type transporter; Function of strongly homologous gene; transporter.
 
     0.802
CCH87398.1
Putative two-component system sensor kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.800
CCH87195.1
Two component signal transduction histidine kinase; Function of strongly homologous gene; regulator.
 
 0.797
CCH87209.1
Two component signal transduction histidine kinase; Function of strongly homologous gene; regulator.
 
 
 0.796
CCH87233.1
Two component signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
 
 0.786
CCH86520.1
ABC transporter, ATPase; Function of strongly homologous gene; enzyme.
       0.773
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.