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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86553.1Homologs of previously reported genes of unknown function. (158 aa)    
Predicted Functional Partners:
CCH86552.1
Endonuclease/exonuclease/phosphatase; Function of strongly homologous gene; enzyme.
 
     0.884
CCH85843.1
Endonuclease/exonuclease/phosphatase; Function of strongly homologous gene; enzyme.
 
     0.681
chaB
Cation transport regulator chaB; Function of strongly homologous gene; regulator.
  
     0.664
CCH90591.1
Homologs of previously reported genes of unknown function.
  
     0.515
CCH86551.1
Putative thiol-disulphide oxidoreductase DCC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.502
CCH89641.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.451
CCH87508.1
Homologs of previously reported genes of unknown function.
 
     0.438
CCH90120.1
Homologs of previously reported genes of unknown function.
 
     0.420
CCH87934.1
Conserved protein of unknown function, TPR repeats; Homologs of previously reported genes of unknown function.
  
     0.416
CCH86911.1
Cyclase/dehydrase; Function of strongly homologous gene; enzyme.
 
     0.411
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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