STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH86568.1FAD dependent oxidoreductase; Function of strongly homologous gene; enzyme. (474 aa)    
Predicted Functional Partners:
CCH88157.1
Phthalate 4,5-dioxygenase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
   
 0.747
CCH86569.1
Homologs of previously reported genes of unknown function.
    
  0.686
CCH88155.1
Transcriptional regulator, TetR family; Function of strongly homologous gene; regulator.
  
     0.528
CCH86567.1
Homologs of previously reported genes of unknown function.
       0.481
CCH85855.1
Homologs of previously reported genes of unknown function.
  
     0.475
cyp
Cytochrome P450 124; Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
  
 0.470
CCH86570.1
Pterin-4-alpha-carbinolamine dehydratase; Function of strongly homologous gene; enzyme.
       0.467
CCH87916.1
Putative DNA-binding transcriptional activator of the SARP family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.453
CCH87897.1
Cytochrome P450; Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
  
 0.436
CCH87918.1
Putative DNA-binding transcriptional activator of the SARP family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.436
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.