STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86572.1Homologs of previously reported genes of unknown function. (40 aa)    
Predicted Functional Partners:
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
 0.966
sir
Sulfite reductase [ferredoxin]; Function of strongly homologous gene; enzyme; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.948
fprA
NADPH-ferredoxin reductase fprA; Function of strongly homologous gene; enzyme.
  
  
 0.890
metC
O-acetylhomoserine/O-acetylserine sulfhydrylase; Function of strongly homologous gene; enzyme.
   
    0.666
metC-2
O-acetylhomoserine/O-acetylserine sulfhydrylase; Function of strongly homologous gene; enzyme.
   
    0.666
gltD
Glutamate synthase [NADPH] small chain, (NADPH-GOGAT); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.612
CCH86570.1
Pterin-4-alpha-carbinolamine dehydratase; Function of strongly homologous gene; enzyme.
       0.552
CCH86729.1
Putative permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
     
 0.548
cysD
Sulfate adenylate transferase, subunit 2 (NodP-like); Function of strongly homologous gene; enzyme.
  
  
 0.509
cysN
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.453
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.