STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH86576.1Homologs of previously reported genes of unknown function. (315 aa)    
Predicted Functional Partners:
CCH86309.1
Homologs of previously reported genes of unknown function.
  
     0.739
CCH88831.1
Putative HNH endonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.692
cbs
Cystathionine beta-synthase; Function of strongly homologous gene; enzyme.
    
  0.643
CCH87588.1
Putative HNH endonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
     0.564
CCH90685.1
Putative HNH endonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.550
CCH86575.1
NUDIX hydrolase; Function of strongly homologous gene; enzyme.
       0.545
CCH87301.1
HNH endonuclease; Function of strongly homologous gene; enzyme.
 
     0.532
CCH90777.1
HNH endonuclease; Function of strongly homologous gene; enzyme.
  
     0.526
gltB
Glutamate synthase [NADPH] large chain (NADPH-GOGAT); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
    0.521
CCH89081.1
Putative HNH endonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.516
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.