STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
CCH86579.1Putative CsbD stress protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor; Belongs to the UPF0337 (CsbD) family. (56 aa)    
Predicted Functional Partners:
CCH86223.1
Homologs of previously reported genes of unknown function.
   
    0.691
osmC
Peroxiredoxin osmC; Function of strongly homologous gene; enzyme.
  
  
 0.604
CCH90098.1
Putative O-antigen/LPS export system ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
    0.584
CCH90099.1
ABC-2 type transporter; Function of strongly homologous gene; transporter.
  
    0.563
CCH86577.1
Peptidase U62 modulator of DNA gyrase; Function of strongly homologous gene; enzyme.
       0.489
CCH86578.1
Peptidase U62 modulator of DNA gyrase; Function of strongly homologous gene; enzyme.
       0.489
CCH88484.1
Phospholipase D/Transphosphatidylase (fragment); Function of strongly homologous gene; enzyme.
 
    0.481
pld
Function of strongly homologous gene; enzyme.
 
    0.480
CCH86830.1
Homologs of previously reported genes of unknown function.
  
  
 0.447
CCH88008.1
Putative membrane protein with transglycosylase-associated domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.447
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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