STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86586.1Homologs of previously reported genes of unknown function. (137 aa)    
Predicted Functional Partners:
mshB
1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway.
       0.781
CCH86583.1
Oligopeptide transport protein (ABC superfamily, ATP-binding protein) (modular protein); Function of strongly homologous gene; enzyme; Belongs to the ABC transporter superfamily.
       0.470
oppF
Oligopeptide transport protein (ABC superfamily, ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ABC transporter superfamily.
       0.470
CCH86582.1
Putative peptide transport permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.458
CCH86581.1
Putative peptide transport permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.405
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.