STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86606.1Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (227 aa)    
Predicted Functional Partners:
CCH86605.1
Homologs of previously reported genes of unknown function.
   
 0.996
CCH86610.1
Putative epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 0.988
CCH86604.1
Oxidoreductase, molybdopterin binding; Function of strongly homologous gene; enzyme.
 
     0.943
CCH86608.1
Membrane protein of unknown function; No homology to any previously reported sequences.
 
   
 0.928
CCH86603.1
Homologs of previously reported genes of unknown function.
       0.764
CCH86601.1
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein; Function of strongly homologous gene; structure.
       0.613
CCH86602.1
Homologs of previously reported genes of unknown function.
       0.613
CCH86607.1
Homologs of previously reported genes of unknown function.
       0.581
CCH85888.1
Glycosyl transferase family 2; Function of strongly homologous gene; enzyme.
 
 
 0.464
CCH86766.1
Glycosyl transferase family 2 (modular protein); Function of strongly homologous gene; enzyme.
  
   
0.464
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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