STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86612.1Homologs of previously reported genes of unknown function. (81 aa)    
Predicted Functional Partners:
tag
3-methyl-adenine DNA glycosylase I, constitutive; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.836
CCH86053.1
Homologs of previously reported genes of unknown function.
  
     0.773
CCH86613.1
Putative cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. Belongs to the peptidase M17 family.
       0.547
mtrB
Two component sensor histidine kinase mtrB; Function of strongly homologous gene; enzyme.
  
     0.542
CCH88618.1
Homologs of previously reported genes of unknown function.
  
     0.536
CCH86133.1
Putative Flp pilus assembly protein TadB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
  
     0.533
lsr
Histone-like DNA-binding regulator lsr2; Function of strongly homologous gene; factor.
  
     0.504
CCH89214.1
Putative lysyl tRNA synthetase-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.475
CCH86610.1
Putative epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.474
CCH86315.1
Homologs of previously reported genes of unknown function.
  
    0.468
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.