Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH86618.1Putative ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (273 aa)    
Predicted Functional Partners:
CCH86617.1
ABC-type multidrug transport system, ATPase component; Function of strongly homologous gene; transporter.
 
     0.937
CCH89653.1
Homologs of previously reported genes of unknown function.
 
  
 0.624
CCH86734.1
Homologs of previously reported genes of unknown function.
  
     0.510
CCH86616.1
Transcriptional regulator, winged helix family (fragment).
       0.488
CCH87582.1
NADPH-dependent fmn reductase.
 
     0.440
msbA
Putative ABC-type multidrug transport system, ATPase and permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  0.429
cydD
Fused cysteine transporter subunits of ABC superfamily: membrane component; Function of strongly homologous gene; enzyme.
     
  0.406
CCH86304.1
ABC efflux pump, inner membrane subunit, DrrB family; Function of strongly homologous gene; transporter.
 
 
 0.404
CCH89325.1
Homologs of previously reported genes of unknown function.
 
  
  0.401
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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