STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH86622.1ABC-type multidrug transport system, ATPase component; Function of strongly homologous gene; transporter. (304 aa)    
Predicted Functional Partners:
CCH86621.1
Homologs of previously reported genes of unknown function.
  
 0.854
MODMU_2354
Fragment of putative modular protein: ATP-binding protein (ABC transporter component)(N-terminal); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 
0.699
CCH90833.1
Putative ABC-type transport system, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
  0.649
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Function of strongly homologous gene; enzyme.
  
  
  0.633
CCH86623.1
Homologs of previously reported genes of unknown function.
       0.544
CCH88904.1
ABC transporter membrane protein; Function of strongly homologous gene; transporter.
 
 0.508
CCH88827.1
Putative ABC-type multidrug transport system, ATPase and permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  0.449
msbA
Putative ABC-type multidrug transport system, ATPase and permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  0.428
CCH85480.1
ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter.
  
  0.427
CCH88971.1
Sulfate-transporting ATPase; Function of strongly homologous gene; enzyme.
  
     0.425
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.