STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86625.1Putative lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (370 aa)    
Predicted Functional Partners:
CCH86624.1
Luciferase family oxidoreductase, group 1; Function of strongly homologous gene; enzyme.
       0.773
CCH86363.1
Homologs of previously reported genes of unknown function.
 
     0.707
CCH86626.1
Homologs of previously reported genes of unknown function.
       0.501
CCH90583.1
Putative DNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
     0.477
CCH90392.1
Homologs of previously reported genes of unknown function.
  
     0.474
CCH87451.1
Homologs of previously reported genes of unknown function.
  
     0.467
CCH86322.1
Homologs of previously reported genes of unknown function.
  
     0.461
CCH89413.1
Short-chain dehydrogenase/reductase SDR; Function of strongly homologous gene; enzyme.
 
     0.453
CCH87672.1
Homologs of previously reported genes of unknown function.
  
     0.440
CCH85546.1
Homologs of previously reported genes of unknown function.
  
     0.417
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.