STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86641.1Branched-chain amino acid transport protein (AzlD); Function of strongly homologous gene; transporter. (105 aa)    
Predicted Functional Partners:
CCH86640.1
Branched-chain amino acid permease (Azaleucine resistance); Function of strongly homologous gene; transporter.
 
  
 0.989
mrp
Antiporter; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.572
CCH86639.1
Exported protein of unknown function; No homology to any previously reported sequences.
       0.572
CCH90055.1
ATPase involved in chromosome partitioning; Function of strongly homologous gene; enzyme.
  
     0.458
CCH90056.1
Homologs of previously reported genes of unknown function; putative enzyme.
  
     0.449
CCH88748.1
Peptidase A24A prepilin type IV; Function of strongly homologous gene; enzyme.
  
     0.432
CCH86345.1
Homologs of previously reported genes of unknown function.
  
     0.428
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.