STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86642.1Conserved protein of unknown function, putative coiled-coil domain; Homologs of previously reported genes of unknown function. (183 aa)    
Predicted Functional Partners:
CCH86643.1
Mg transporter MgtE with CBS domain; Function of strongly homologous gene; transporter.
 
     0.954
CCH86644.1
Putative phenazine biosynthesis protein PhzF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.634
CCH86646.1
Citrate lyase beta subunit; Function of strongly homologous gene; enzyme; Belongs to the HpcH/HpaI aldolase family.
       0.592
CCH86645.1
Homologs of previously reported genes of unknown function.
       0.582
CCH88829.1
Homologs of previously reported genes of unknown function.
  
     0.502
CCH89775.1
Homologs of previously reported genes of unknown function.
 
     0.419
CCH86772.1
Homologs of previously reported genes of unknown function.
     
 0.418
CCH85478.1
Homologs of previously reported genes of unknown function.
 
     0.416
CCH89326.1
Nucleic acid binding OB-fold tRNA/helicase; Function of strongly homologous gene; enzyme.
  
     0.400
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.