STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCH86644.1Putative phenazine biosynthesis protein PhzF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (293 aa)    
Predicted Functional Partners:
CCH86645.1
Homologs of previously reported genes of unknown function.
 
     0.818
CCH86642.1
Conserved protein of unknown function, putative coiled-coil domain; Homologs of previously reported genes of unknown function.
       0.618
CCH86643.1
Mg transporter MgtE with CBS domain; Function of strongly homologous gene; transporter.
       0.616
CCH86646.1
Citrate lyase beta subunit; Function of strongly homologous gene; enzyme; Belongs to the HpcH/HpaI aldolase family.
       0.596
gltB
Glutamate synthase [NADPH] large chain (NADPH-GOGAT); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.457
CCH86950.1
Isochorismatase hydrolase; Function of strongly homologous gene; enzyme.
    
  0.404
CCH89452.1
Isochorismatase hydrolase; Function of strongly homologous gene; enzyme.
    
  0.404
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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