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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86651.1Glycosyl transferase; Function of strongly homologous gene; enzyme. (431 aa)    
Predicted Functional Partners:
CCH86650.1
Glycosyl transferase; Function of strongly homologous gene; enzyme.
  
 0.989
wcaJ-2
Undecaprenyl-phosphate galactose phosphotransferase; Function of strongly homologous gene; enzyme.
  
  
 0.694
CCH90098.1
Putative O-antigen/LPS export system ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.674
CCH90099.1
ABC-2 type transporter; Function of strongly homologous gene; transporter.
  
  
 0.576
CCH85980.1
Putative D,D-heptose 1,7-bisphosphate phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.572
CCH90481.1
Sensor protein; Function of strongly homologous gene; enzyme.
 
 
 0.536
CCH86652.1
Zn-dependent oxidoreductase, NADPH:quinone reductase; Function of strongly homologous gene; enzyme.
  
    0.533
CCH85938.1
Lipopolysaccharide biosynthesis protein; Function of strongly homologous gene; enzyme.
  
  
 0.481
CCH88118.1
Non-specific protein-tyrosine kinase; Function of strongly homologous gene; enzyme.
  
  
 0.481
CCH90658.1
Sensor protein with an histidine kinase signal transduction domain; Function of strongly homologous gene; regulator.
  
 
 0.476
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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