STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH86674.1Putative hydrolase or acyltransferase of alpha/beta superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (253 aa)    
Predicted Functional Partners:
CCH86675.1
Glutamate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glutamate synthase family.
       0.773
CCH86676.1
Subtilisin-like protease; Function of strongly homologous gene; enzyme; Belongs to the peptidase S8 family.
  
    0.483
tadE
Pilus assembly protein; Function of strongly homologous gene; cell process.
  
     0.458
CCH86779.1
Homologs of previously reported genes of unknown function.
  
     0.456
CCH90032.1
Alpha/beta hydrolase; Function of strongly homologous gene; enzyme.
 
     0.434
accC
Carbamoyl-phosphate synthase L chain ATP-binding protein; Function of strongly homologous gene; enzyme.
   
 0.411
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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