STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86708.1K+ transport system, NAD-binding component; Function of strongly homologous gene; transporter. (341 aa)    
Predicted Functional Partners:
nudC
NADH pyrophosphatase; Function of strongly homologous gene; enzyme; Belongs to the Nudix hydrolase family.
      0.674
CCH86707.1
Amino acid permease; Function of strongly homologous gene; transporter.
     
 0.630
CCH86709.1
Homologs of previously reported genes of unknown function.
       0.601
CCH86710.1
Homologs of previously reported genes of unknown function.
       0.601
CCH86706.1
Homologs of previously reported genes of unknown function.
     
 0.541
ribBA
Riboflavin biosynthesis protein ribBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
   0.498
CCH90920.1
Homologs of previously reported genes of unknown function.
  
     0.490
CCH90034.1
Conserved protein of unknown function, putative ATP-binding domain; Homologs of previously reported genes of unknown function.
 
     0.489
CCH86711.1
Drug exporter of the RND superfamily-like protein; Function of strongly homologous gene; transporter.
       0.433
CCH90223.1
Monofunctional chorismate mutase; Function of strongly homologous gene; enzyme.
  
   
 0.420
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.