Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH86724.1Homologs of previously reported genes of unknown function. (169 aa)    
Predicted Functional Partners:
CCH90658.1
Sensor protein with an histidine kinase signal transduction domain; Function of strongly homologous gene; regulator.
  
 0.671
CCH87962.1
Anti-sigma regulatory factor, serine/threonine protein kinase; Function of strongly homologous gene; factor.
 
   0.661
CCH86872.1
Putative anti-sigma regulatory factor, serine/threonine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
   0.637
CCH89894.1
Homologs of previously reported genes of unknown function.
  
    0.628
ureD
Urease accessory protein; Function of strongly homologous gene; enzyme.
  
     0.627
CCH85589.1
Putative anti-sigma regulatory factor, serine/threonine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
   0.594
CCH90899.1
Putative PAS/PAC light sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
 0.584
fliG
Flagellar motor switch protein fliG; Function of strongly homologous gene; structure.
  
   0.565
CCH85679.1
Putative anti-sigma regulatory factor, serine/threonine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   0.559
CCH85693.1
Universal stress protein; Function of strongly homologous gene; cell process.
  
    0.558
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.